dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01987
Location and strand information: 2352049 - 2353689 (-)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01988
Location and strand information: 2353703 - 2354368 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01989
Location and strand information: 2355128 - 2355343 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01990
Location and strand information: 2355531 - 2356898 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01991
Location and strand information: 2357210 - 2358211 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01992
Location and strand information: 2358594 - 2359931 (+)
Family: 2.A.2.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01993
Location and strand information: 2361469 - 2361663 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01994
Location and strand information: 2362591 - 2365290 (+)
Family: CBM20|GH77
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4947
Protein molecular weight: 106069.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01995
Location and strand information: 2365386 - 2366240 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01996
Location and strand information: 2366287 - 2368419 (+)
Family: GH97
Protein type: CAZyme
Protein description: Glucan 1,4-alpha-glucosidase SusB
Protein isoelectric point: 6.6435
Protein molecular weight: 80765.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01997
Location and strand information: 2368450 - 2370351 (+)
Family: CBM20|GH13_14|CBM41|GH13|CBM48
Protein type: CAZyme
Protein description: Pullulanase
Protein isoelectric point: 6.9056
Protein molecular weight: 70421.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01998
Location and strand information: 2370365 - 2372227 (+)
Family: GH13
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 8.9356
Protein molecular weight: 71335.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_01999
Location and strand information: 2372967 - 2373149 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02000
Location and strand information: 2373159 - 2373347 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02001
Location and strand information: 2373286 - 2376489 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02002
Location and strand information: 2376544 - 2378295 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02003
Location and strand information: 2378333 - 2380105 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02004
Location and strand information: 2380136 - 2381773 (+)
Family: GH43_4|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6458
Protein molecular weight: 61959.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02005
Location and strand information: 2381774 - 2382823 (+)
Family: GH43|GH43_5
Protein type: CAZyme
Protein description: Intracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 9.8126
Protein molecular weight: 39529.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02006
Location and strand information: 2382847 - 2383341 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02007
Location and strand information: 2383424 - 2383819 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02008
Location and strand information: 2384839 - 2388249 (-)
Family: GT2|CE4|GH18
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 8.5927
Protein molecular weight: 130344.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02009
Location and strand information: 2388644 - 2391628 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02010
Location and strand information: 2391707 - 2392906 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001360_1|CGC29
Gene ID: MGYG000001360_02011
Location and strand information: 2393154 - 2395508 (-)
Family: CBM32|GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8444
Protein molecular weight: 89057.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001360_01994	GH77_e3\|CBM20_e9\|2.4.1.25	starch
MGYG000001360_01996	GH97_e1\|3.2.1.3\|3.2.1.20	alpha-glucan
MGYG000001360_01997	GH13_e38\|CBM48_e41\|CBM41_e2\|CBM20_e23\|3.2.1.68\|3.2.1.41\|3.2.1.1\|3.2.1.-	starch
MGYG000001360_01998	GH13_e161\|3.2.1.54	starch
MGYG000001360_02004	GH43_e169\|3.2.1.99	arabinan
MGYG000001360_02005	GH43_e23\|3.2.1.99	arabinan
MGYG000001360_02008	GT2_e328\|GH18_e38\|CE4_e0
MGYG000001360_02011	GH35_e29\|CBM32_e73

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001360_01987	Starch-binding protein SusD	TC	2352049	2353689	-	8.A.46.1.1
MGYG000001360_01988	TonB-dependent receptor SusC	TC	2353703	2354368	-	1.B.14.6.1
MGYG000001360_01989	hypothetical protein	null	2355128	2355343	-	No domain
MGYG000001360_01990	TonB-dependent receptor SusC	TC	2355531	2356898	-	1.B.14.6.1
MGYG000001360_01991	HTH-type transcriptional repressor CytR	TF	2357210	2358211	+	LacI
MGYG000001360_01992	hypothetical protein	TC	2358594	2359931	+	2.A.2.6.2
MGYG000001360_01993	hypothetical protein	null	2361469	2361663	+	No domain
MGYG000001360_01994	hypothetical protein	CAZyme	2362591	2365290	+	CBM20\| GH77
MGYG000001360_01995	hypothetical protein	null	2365386	2366240	+	Rce1-like
MGYG000001360_01996	Glucan 1,4-alpha-glucosidase SusB	CAZyme	2366287	2368419	+	GH97
MGYG000001360_01997	Pullulanase	CAZyme	2368450	2370351	+	CBM20\| GH13_14\| CBM41\| GH13\| CBM48
MGYG000001360_01998	1,4-alpha-glucan branching enzyme GlgB	CAZyme	2370365	2372227	+	GH13
MGYG000001360_01999	hypothetical protein	null	2372967	2373149	+	No domain
MGYG000001360_02000	hypothetical protein	null	2373159	2373347	+	No domain
MGYG000001360_02001	TonB-dependent receptor SusC	TC	2373286	2376489	+	1.B.14.6.1
MGYG000001360_02002	hypothetical protein	null	2376544	2378295	+	SusD-like_3\| SusD_RagB
MGYG000001360_02003	hypothetical protein	null	2378333	2380105	+	No domain
MGYG000001360_02004	hypothetical protein	CAZyme	2380136	2381773	+	GH43_4\| GH43
MGYG000001360_02005	Intracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	2381774	2382823	+	GH43\| GH43_5
MGYG000001360_02006	hypothetical protein	null	2382847	2383341	-	Pyridox_ox_2
MGYG000001360_02007	hypothetical protein	null	2383424	2383819	-	No domain
MGYG000001360_02008	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	2384839	2388249	-	GT2\| CE4\| GH18
MGYG000001360_02009	HTH-type transcriptional activator RhaS	TF	2388644	2391628	-	HTH_AraC
MGYG000001360_02010	hypothetical protein	null	2391707	2392906	-	No domain
MGYG000001360_02011	hypothetical protein	CAZyme	2393154	2395508	-	CBM32\| GH35
Protein ID	Protein Name	Type	Start	End	Strand	Signature